PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_207540_dxfc.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 539aa    MW: 62101.5 Da    PI: 4.5764
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_207540_dxfc.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.61.5e-05404449755
                         HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +r   R ++i ++   L  llP     +  +++ a++Le+Av+YIk L+
  Bv9_207540_dxfc.t1 404 KRRSMRQRKISEKVYCLGMLLPGG---YRHRNNTADMLEEAVKYIKFLE 449
                         555678889999999999999998...899****************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.026397448IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.5E-4401454IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.46E-8408459IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.60E-5409452No hitNo description
Gene3DG3DSA:4.10.280.103.0E-6412455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    Send to blast
MWGNVKFIND LPTNFDPSYL KGLINSLGYN NIVKLHYCDP LKELHKGIRF LGYDGTTFGM  60
FISLLYEFKM LDIFTEHDEG EVECLTQETV VSNTCKDVIV GNMVCEPLSH YSSGSDDIDY  120
DEEGSDTEDD EVREAREQLQ EDKRREKSYE EEIDSLSRLA ARKCVHNGDS DYEGESSDFD  180
SPHNSDGEDS TPEDQNYETH FQNFQTMPYS DTDKYNENPL LVHDYTTYFL SPHSLFLPPP  240
PPPSSLNFID PTSSDFSTLP DLFSVENLTH SPSPPLPLLK DDYSEISNDK KPLKKSDISE  300
EVYSPLSFLS FLIAPPIHNI PENKNYETHF KNILTMPYSE DDKYNNFLYR HLSPPSSDFI  360
IPTSSDFSTT LLPNFPPSKD DYSLHSILEN FKTTKEDKKK KLQKRRSMRQ RKISEKVYCL  420
GMLLPGGYRH RNNTADMLEE AVKYIKFLEA QVNALWCMPT ESRIGELRDD GRDVYSSVVG  480
ELVKLSRPEL LQVVVNSPVA QKVMADNQWC LYSIEQMELL KRMEARQKVI HQFMNNLPL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0J8BL280.0A0A0J8BL28_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-14bHLH family protein